langchain/libs/partners/mongodb/langchain_mongodb/utils.py
Joydeep Banik Roy 3796672c67
community, milvus, pinecone, qdrant, mongo: Broadcast operation failure while using simsimd beyond v3.7.7 (#22271)
- [ ] **Packages affected**: 
  - community: fix `cosine_similarity` to support simsimd beyond 3.7.7
- partners/milvus: fix `cosine_similarity` to support simsimd beyond
3.7.7
- partners/mongodb: fix `cosine_similarity` to support simsimd beyond
3.7.7
- partners/pinecone: fix `cosine_similarity` to support simsimd beyond
3.7.7
- partners/qdrant: fix `cosine_similarity` to support simsimd beyond
3.7.7


- [ ] **Broadcast operation failure while using simsimd beyond v3.7.7**:
- **Description:** I was using simsimd 4.3.1 and the unsupported operand
type issue popped up. When I checked out the repo and ran the tests,
they failed as well (have attached a screenshot for that). Looks like it
is a variant of https://github.com/langchain-ai/langchain/issues/18022 .
Prior to 3.7.7, simd.cdist returned an ndarray but now it returns
simsimd.DistancesTensor which is ineligible for a broadcast operation
with numpy. With this change, it also remove the need to explicitly cast
`Z` to numpy array
    - **Issue:** #19905
    - **Dependencies:** No
    - **Twitter handle:** https://x.com/GetzJoydeep

<img width="1622" alt="Screenshot 2024-05-29 at 2 50 00 PM"
src="https://github.com/langchain-ai/langchain/assets/31132555/fb27b383-a9ae-4a6f-b355-6d503b72db56">

- [ ] **Considerations**: 
1. I started with community but since similar changes were there in
Milvus, MongoDB, Pinecone, and QDrant so I modified their files as well.
If touching multiple packages in one PR is not the norm, then I can
remove them from this PR and raise separate ones
2. I have run and verified that the tests work. Since, only MongoDB had
tests, I ran theirs and verified it works as well. Screenshots attached
:
<img width="1573" alt="Screenshot 2024-05-29 at 2 52 13 PM"
src="https://github.com/langchain-ai/langchain/assets/31132555/ce87d1ea-19b6-4900-9384-61fbc1a30de9">
<img width="1614" alt="Screenshot 2024-05-29 at 3 33 51 PM"
src="https://github.com/langchain-ai/langchain/assets/31132555/6ce1d679-db4c-4291-8453-01028ab2dca5">
  

I have added a test for simsimd. I feel it may not go well with the
CI/CD setup as installing simsimd is not a dependency requirement. I
have just imported simsimd to ensure simsimd cosine similarity is
invoked. However, its not a good approach. Suggestions are welcome and I
can make the required changes on the PR. Please provide guidance on the
same as I am new to the community.

---------

Co-authored-by: Bagatur <baskaryan@gmail.com>
Co-authored-by: Bagatur <22008038+baskaryan@users.noreply.github.com>
2024-06-04 17:36:31 +00:00

86 lines
3.0 KiB
Python

"""
Tools for the Maximal Marginal Relevance (MMR) reranking.
Duplicated from langchain_community to avoid cross-dependencies.
Functions "maximal_marginal_relevance" and "cosine_similarity"
are duplicated in this utility respectively from modules:
- "libs/community/langchain_community/vectorstores/utils.py"
- "libs/community/langchain_community/utils/math.py"
"""
import logging
from typing import List, Union
import numpy as np
logger = logging.getLogger(__name__)
Matrix = Union[List[List[float]], List[np.ndarray], np.ndarray]
def cosine_similarity(X: Matrix, Y: Matrix) -> np.ndarray:
"""Row-wise cosine similarity between two equal-width matrices."""
if len(X) == 0 or len(Y) == 0:
return np.array([])
X = np.array(X)
Y = np.array(Y)
if X.shape[1] != Y.shape[1]:
raise ValueError(
f"Number of columns in X and Y must be the same. X has shape {X.shape} "
f"and Y has shape {Y.shape}."
)
try:
import simsimd as simd # type: ignore
X = np.array(X, dtype=np.float32)
Y = np.array(Y, dtype=np.float32)
Z = 1 - np.array(simd.cdist(X, Y, metric="cosine"))
return Z
except ImportError:
logger.debug(
"Unable to import simsimd, defaulting to NumPy implementation. If you want "
"to use simsimd please install with `pip install simsimd`."
)
X_norm = np.linalg.norm(X, axis=1)
Y_norm = np.linalg.norm(Y, axis=1)
# Ignore divide by zero errors run time warnings as those are handled below.
with np.errstate(divide="ignore", invalid="ignore"):
similarity = np.dot(X, Y.T) / np.outer(X_norm, Y_norm)
similarity[np.isnan(similarity) | np.isinf(similarity)] = 0.0
return similarity
def maximal_marginal_relevance(
query_embedding: np.ndarray,
embedding_list: list,
lambda_mult: float = 0.5,
k: int = 4,
) -> List[int]:
"""Calculate maximal marginal relevance."""
if min(k, len(embedding_list)) <= 0:
return []
if query_embedding.ndim == 1:
query_embedding = np.expand_dims(query_embedding, axis=0)
similarity_to_query = cosine_similarity(query_embedding, embedding_list)[0]
most_similar = int(np.argmax(similarity_to_query))
idxs = [most_similar]
selected = np.array([embedding_list[most_similar]])
while len(idxs) < min(k, len(embedding_list)):
best_score = -np.inf
idx_to_add = -1
similarity_to_selected = cosine_similarity(embedding_list, selected)
for i, query_score in enumerate(similarity_to_query):
if i in idxs:
continue
redundant_score = max(similarity_to_selected[i])
equation_score = (
lambda_mult * query_score - (1 - lambda_mult) * redundant_score
)
if equation_score > best_score:
best_score = equation_score
idx_to_add = i
idxs.append(idx_to_add)
selected = np.append(selected, [embedding_list[idx_to_add]], axis=0)
return idxs