mirror of
https://github.com/hwchase17/langchain
synced 2024-11-11 19:11:02 +00:00
a0c2281540
```python """python scripts/update_mypy_ruff.py""" import glob import tomllib from pathlib import Path import toml import subprocess import re ROOT_DIR = Path(__file__).parents[1] def main(): for path in glob.glob(str(ROOT_DIR / "libs/**/pyproject.toml"), recursive=True): print(path) with open(path, "rb") as f: pyproject = tomllib.load(f) try: pyproject["tool"]["poetry"]["group"]["typing"]["dependencies"]["mypy"] = ( "^1.10" ) pyproject["tool"]["poetry"]["group"]["lint"]["dependencies"]["ruff"] = ( "^0.5" ) except KeyError: continue with open(path, "w") as f: toml.dump(pyproject, f) cwd = "/".join(path.split("/")[:-1]) completed = subprocess.run( "poetry lock --no-update; poetry install --with typing; poetry run mypy . --no-color", cwd=cwd, shell=True, capture_output=True, text=True, ) logs = completed.stdout.split("\n") to_ignore = {} for l in logs: if re.match("^(.*)\:(\d+)\: error:.*\[(.*)\]", l): path, line_no, error_type = re.match( "^(.*)\:(\d+)\: error:.*\[(.*)\]", l ).groups() if (path, line_no) in to_ignore: to_ignore[(path, line_no)].append(error_type) else: to_ignore[(path, line_no)] = [error_type] print(len(to_ignore)) for (error_path, line_no), error_types in to_ignore.items(): all_errors = ", ".join(error_types) full_path = f"{cwd}/{error_path}" try: with open(full_path, "r") as f: file_lines = f.readlines() except FileNotFoundError: continue file_lines[int(line_no) - 1] = ( file_lines[int(line_no) - 1][:-1] + f" # type: ignore[{all_errors}]\n" ) with open(full_path, "w") as f: f.write("".join(file_lines)) subprocess.run( "poetry run ruff format .; poetry run ruff --select I --fix .", cwd=cwd, shell=True, capture_output=True, text=True, ) if __name__ == "__main__": main() ```
192 lines
7.0 KiB
Python
192 lines
7.0 KiB
Python
"""Question answering over a graph."""
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from __future__ import annotations
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from typing import TYPE_CHECKING, Any, Dict, List, Optional
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if TYPE_CHECKING:
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import rdflib
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from langchain.chains.base import Chain
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from langchain.chains.llm import LLMChain
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from langchain_core.callbacks.manager import CallbackManager, CallbackManagerForChainRun
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from langchain_core.language_models import BaseLanguageModel
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from langchain_core.prompts.base import BasePromptTemplate
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from langchain_core.pydantic_v1 import Field
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from langchain_community.chains.graph_qa.prompts import (
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GRAPHDB_QA_PROMPT,
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GRAPHDB_SPARQL_FIX_PROMPT,
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GRAPHDB_SPARQL_GENERATION_PROMPT,
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)
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from langchain_community.graphs import OntotextGraphDBGraph
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class OntotextGraphDBQAChain(Chain):
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"""Question-answering against Ontotext GraphDB
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https://graphdb.ontotext.com/ by generating SPARQL queries.
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*Security note*: Make sure that the database connection uses credentials
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that are narrowly-scoped to only include necessary permissions.
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Failure to do so may result in data corruption or loss, since the calling
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code may attempt commands that would result in deletion, mutation
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of data if appropriately prompted or reading sensitive data if such
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data is present in the database.
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The best way to guard against such negative outcomes is to (as appropriate)
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limit the permissions granted to the credentials used with this tool.
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See https://python.langchain.com/docs/security for more information.
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"""
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graph: OntotextGraphDBGraph = Field(exclude=True)
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sparql_generation_chain: LLMChain
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sparql_fix_chain: LLMChain
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max_fix_retries: int
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qa_chain: LLMChain
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input_key: str = "query" #: :meta private:
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output_key: str = "result" #: :meta private:
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@property
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def input_keys(self) -> List[str]:
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return [self.input_key]
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@property
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def output_keys(self) -> List[str]:
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_output_keys = [self.output_key]
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return _output_keys
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@classmethod
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def from_llm(
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cls,
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llm: BaseLanguageModel,
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*,
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sparql_generation_prompt: BasePromptTemplate = GRAPHDB_SPARQL_GENERATION_PROMPT,
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sparql_fix_prompt: BasePromptTemplate = GRAPHDB_SPARQL_FIX_PROMPT,
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max_fix_retries: int = 5,
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qa_prompt: BasePromptTemplate = GRAPHDB_QA_PROMPT,
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**kwargs: Any,
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) -> OntotextGraphDBQAChain:
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"""Initialize from LLM."""
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sparql_generation_chain = LLMChain(llm=llm, prompt=sparql_generation_prompt)
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sparql_fix_chain = LLMChain(llm=llm, prompt=sparql_fix_prompt)
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max_fix_retries = max_fix_retries
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qa_chain = LLMChain(llm=llm, prompt=qa_prompt)
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return cls(
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qa_chain=qa_chain,
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sparql_generation_chain=sparql_generation_chain,
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sparql_fix_chain=sparql_fix_chain,
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max_fix_retries=max_fix_retries,
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**kwargs,
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)
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def _call(
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self,
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inputs: Dict[str, Any],
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run_manager: Optional[CallbackManagerForChainRun] = None,
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) -> Dict[str, str]:
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"""
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Generate a SPARQL query, use it to retrieve a response from GraphDB and answer
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the question.
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"""
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_run_manager = run_manager or CallbackManagerForChainRun.get_noop_manager()
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callbacks = _run_manager.get_child()
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prompt = inputs[self.input_key]
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ontology_schema = self.graph.get_schema
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sparql_generation_chain_result = self.sparql_generation_chain.invoke(
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{"prompt": prompt, "schema": ontology_schema}, callbacks=callbacks
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)
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generated_sparql = sparql_generation_chain_result[
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self.sparql_generation_chain.output_key
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]
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generated_sparql = self._get_prepared_sparql_query(
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_run_manager, callbacks, generated_sparql, ontology_schema
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)
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query_results = self._execute_query(generated_sparql)
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qa_chain_result = self.qa_chain.invoke(
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{"prompt": prompt, "context": query_results}, callbacks=callbacks
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)
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result = qa_chain_result[self.qa_chain.output_key]
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return {self.output_key: result}
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def _get_prepared_sparql_query(
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self,
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_run_manager: CallbackManagerForChainRun,
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callbacks: CallbackManager,
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generated_sparql: str,
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ontology_schema: str,
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) -> str:
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try:
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return self._prepare_sparql_query(_run_manager, generated_sparql)
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except Exception as e:
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retries = 0
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error_message = str(e)
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self._log_invalid_sparql_query(
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_run_manager, generated_sparql, error_message
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)
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while retries < self.max_fix_retries:
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try:
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sparql_fix_chain_result = self.sparql_fix_chain.invoke(
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{
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"error_message": error_message,
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"generated_sparql": generated_sparql,
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"schema": ontology_schema,
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},
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callbacks=callbacks,
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)
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generated_sparql = sparql_fix_chain_result[
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self.sparql_fix_chain.output_key
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]
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return self._prepare_sparql_query(_run_manager, generated_sparql)
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except Exception as e:
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retries += 1
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parse_exception = str(e)
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self._log_invalid_sparql_query(
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_run_manager, generated_sparql, parse_exception
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)
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raise ValueError("The generated SPARQL query is invalid.")
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def _prepare_sparql_query(
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self, _run_manager: CallbackManagerForChainRun, generated_sparql: str
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) -> str:
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from rdflib.plugins.sparql import prepareQuery
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prepareQuery(generated_sparql)
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self._log_prepared_sparql_query(_run_manager, generated_sparql)
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return generated_sparql
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def _log_prepared_sparql_query(
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self, _run_manager: CallbackManagerForChainRun, generated_query: str
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) -> None:
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_run_manager.on_text("Generated SPARQL:", end="\n", verbose=self.verbose)
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_run_manager.on_text(
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generated_query, color="green", end="\n", verbose=self.verbose
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)
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def _log_invalid_sparql_query(
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self,
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_run_manager: CallbackManagerForChainRun,
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generated_query: str,
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error_message: str,
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) -> None:
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_run_manager.on_text("Invalid SPARQL query: ", end="\n", verbose=self.verbose)
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_run_manager.on_text(
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generated_query, color="red", end="\n", verbose=self.verbose
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)
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_run_manager.on_text(
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"SPARQL Query Parse Error: ", end="\n", verbose=self.verbose
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)
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_run_manager.on_text(
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error_message, color="red", end="\n\n", verbose=self.verbose
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)
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def _execute_query(self, query: str) -> List[rdflib.query.ResultRow]:
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try:
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return self.graph.query(query)
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except Exception:
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raise ValueError("Failed to execute the generated SPARQL query.")
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