Add neo4j vector support (#9770)

Neo4j has added vector index integration just recently. To allow both
ingestion and integrating it as vector RAG applications, I wrapped it as
a vector store as the implementation is completely different from
`GraphCypherQAChain`. Here, we are not generating any Cypher statements
at query time, we are simply doing the vector similarity search using
the new vector index as if we were dealing with a vector database.

---------

Co-authored-by: Bagatur <baskaryan@gmail.com>
pull/9938/head
Tomaz Bratanic 1 year ago committed by GitHub
parent 49ebbe4bcd
commit db13fba7ea
No known key found for this signature in database
GPG Key ID: 4AEE18F83AFDEB23

@ -0,0 +1,440 @@
{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"# Neo4j Vector Index\n",
"\n",
">[Neo4j](https://neo4j.com/) is an open-source graph database with integrated support for vector similarity search\n",
"\n",
"It supports:\n",
"- approximate nearest neighbor search\n",
"- L2 distance and cosine distance\n",
"\n",
"This notebook shows how to use the Neo4j vector index (`Neo4jVector`)."
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"See the [installation instruction](https://neo4j.com/docs/operations-manual/current/installation/)."
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {
"tags": []
},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Requirement already satisfied: neo4j in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (5.11.0)\n",
"Requirement already satisfied: pytz in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from neo4j) (2023.3)\n",
"Requirement already satisfied: openai in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (0.27.6)\n",
"Requirement already satisfied: requests>=2.20 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from openai) (2.31.0)\n",
"Requirement already satisfied: tqdm in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from openai) (4.66.1)\n",
"Requirement already satisfied: aiohttp in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from openai) (3.8.5)\n",
"Requirement already satisfied: charset-normalizer<4,>=2 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from requests>=2.20->openai) (3.2.0)\n",
"Requirement already satisfied: idna<4,>=2.5 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from requests>=2.20->openai) (3.4)\n",
"Requirement already satisfied: urllib3<3,>=1.21.1 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from requests>=2.20->openai) (2.0.4)\n",
"Requirement already satisfied: certifi>=2017.4.17 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from requests>=2.20->openai) (2023.7.22)\n",
"Requirement already satisfied: attrs>=17.3.0 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from aiohttp->openai) (23.1.0)\n",
"Requirement already satisfied: multidict<7.0,>=4.5 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from aiohttp->openai) (6.0.4)\n",
"Requirement already satisfied: async-timeout<5.0,>=4.0.0a3 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from aiohttp->openai) (4.0.3)\n",
"Requirement already satisfied: yarl<2.0,>=1.0 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from aiohttp->openai) (1.9.2)\n",
"Requirement already satisfied: frozenlist>=1.1.1 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from aiohttp->openai) (1.4.0)\n",
"Requirement already satisfied: aiosignal>=1.1.2 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from aiohttp->openai) (1.3.1)\n",
"Requirement already satisfied: tiktoken in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (0.4.0)\n",
"Requirement already satisfied: regex>=2022.1.18 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from tiktoken) (2023.8.8)\n",
"Requirement already satisfied: requests>=2.26.0 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from tiktoken) (2.31.0)\n",
"Requirement already satisfied: charset-normalizer<4,>=2 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from requests>=2.26.0->tiktoken) (3.2.0)\n",
"Requirement already satisfied: idna<4,>=2.5 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from requests>=2.26.0->tiktoken) (3.4)\n",
"Requirement already satisfied: urllib3<3,>=1.21.1 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from requests>=2.26.0->tiktoken) (2.0.4)\n",
"Requirement already satisfied: certifi>=2017.4.17 in /home/tomaz/anaconda3/envs/myenv/lib/python3.11/site-packages (from requests>=2.26.0->tiktoken) (2023.7.22)\n"
]
}
],
"source": [
"# Pip install necessary package\n",
"!pip install neo4j\n",
"!pip install openai\n",
"!pip install tiktoken"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"We want to use `OpenAIEmbeddings` so we have to get the OpenAI API Key."
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [
{
"name": "stdin",
"output_type": "stream",
"text": [
"OpenAI API Key: ········\n"
]
}
],
"source": [
"import os\n",
"import getpass\n",
"\n",
"os.environ[\"OPENAI_API_KEY\"] = getpass.getpass(\"OpenAI API Key:\")"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {
"tags": []
},
"outputs": [],
"source": [
"from langchain.embeddings.openai import OpenAIEmbeddings\n",
"from langchain.text_splitter import CharacterTextSplitter\n",
"from langchain.vectorstores import Neo4jVector\n",
"from langchain.document_loaders import TextLoader\n",
"from langchain.docstore.document import Document"
]
},
{
"cell_type": "code",
"execution_count": 4,
"metadata": {},
"outputs": [],
"source": [
"loader = TextLoader(\"../../../state_of_the_union.txt\")\n",
"documents = loader.load()\n",
"text_splitter = CharacterTextSplitter(chunk_size=1000, chunk_overlap=0)\n",
"docs = text_splitter.split_documents(documents)\n",
"\n",
"embeddings = OpenAIEmbeddings()"
]
},
{
"cell_type": "code",
"execution_count": 5,
"metadata": {},
"outputs": [],
"source": [
"# Neo4jVector requires the Neo4j database credentials\n",
"\n",
"url = \"bolt://localhost:7687\"\n",
"username = \"neo4j\"\n",
"password = \"pleaseletmein\"\n",
"\n",
"# You can also use environment variables instead of directly passing named parameters\n",
"#os.environ[\"NEO4J_URL\"] = \"bolt://localhost:7687\"\n",
"#os.environ[\"NEO4J_USERNAME\"] = \"neo4j\"\n",
"#os.environ[\"NEO4J_PASSWORD\"] = \"pleaseletmein\""
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Similarity Search with Cosine Distance (Default)"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {},
"outputs": [],
"source": [
"# The Neo4jVector Module will connect to Neo4j and create a vector index if needed.\n",
"\n",
"db = Neo4jVector.from_documents(\n",
" docs, OpenAIEmbeddings(), url=url, username=username, password=password\n",
")"
]
},
{
"cell_type": "code",
"execution_count": 7,
"metadata": {},
"outputs": [],
"source": [
"query = \"What did the president say about Ketanji Brown Jackson\"\n",
"docs_with_score = db.similarity_search_with_score(query)"
]
},
{
"cell_type": "code",
"execution_count": 8,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"--------------------------------------------------------------------------------\n",
"Score: 0.9077161550521851\n",
"Tonight. I call on the Senate to: Pass the Freedom to Vote Act. Pass the John Lewis Voting Rights Act. And while youre at it, pass the Disclose Act so Americans can know who is funding our elections. \n",
"\n",
"Tonight, Id like to honor someone who has dedicated his life to serve this country: Justice Stephen Breyer—an Army veteran, Constitutional scholar, and retiring Justice of the United States Supreme Court. Justice Breyer, thank you for your service. \n",
"\n",
"One of the most serious constitutional responsibilities a President has is nominating someone to serve on the United States Supreme Court. \n",
"\n",
"And I did that 4 days ago, when I nominated Circuit Court of Appeals Judge Ketanji Brown Jackson. One of our nations top legal minds, who will continue Justice Breyers legacy of excellence.\n",
"--------------------------------------------------------------------------------\n",
"--------------------------------------------------------------------------------\n",
"Score: 0.9077161550521851\n",
"Tonight. I call on the Senate to: Pass the Freedom to Vote Act. Pass the John Lewis Voting Rights Act. And while youre at it, pass the Disclose Act so Americans can know who is funding our elections. \n",
"\n",
"Tonight, Id like to honor someone who has dedicated his life to serve this country: Justice Stephen Breyer—an Army veteran, Constitutional scholar, and retiring Justice of the United States Supreme Court. Justice Breyer, thank you for your service. \n",
"\n",
"One of the most serious constitutional responsibilities a President has is nominating someone to serve on the United States Supreme Court. \n",
"\n",
"And I did that 4 days ago, when I nominated Circuit Court of Appeals Judge Ketanji Brown Jackson. One of our nations top legal minds, who will continue Justice Breyers legacy of excellence.\n",
"--------------------------------------------------------------------------------\n",
"--------------------------------------------------------------------------------\n",
"Score: 0.891287088394165\n",
"A former top litigator in private practice. A former federal public defender. And from a family of public school educators and police officers. A consensus builder. Since shes been nominated, shes received a broad range of support—from the Fraternal Order of Police to former judges appointed by Democrats and Republicans. \n",
"\n",
"And if we are to advance liberty and justice, we need to secure the Border and fix the immigration system. \n",
"\n",
"We can do both. At our border, weve installed new technology like cutting-edge scanners to better detect drug smuggling. \n",
"\n",
"Weve set up joint patrols with Mexico and Guatemala to catch more human traffickers. \n",
"\n",
"Were putting in place dedicated immigration judges so families fleeing persecution and violence can have their cases heard faster. \n",
"\n",
"Were securing commitments and supporting partners in South and Central America to host more refugees and secure their own borders.\n",
"--------------------------------------------------------------------------------\n",
"--------------------------------------------------------------------------------\n",
"Score: 0.891287088394165\n",
"A former top litigator in private practice. A former federal public defender. And from a family of public school educators and police officers. A consensus builder. Since shes been nominated, shes received a broad range of support—from the Fraternal Order of Police to former judges appointed by Democrats and Republicans. \n",
"\n",
"And if we are to advance liberty and justice, we need to secure the Border and fix the immigration system. \n",
"\n",
"We can do both. At our border, weve installed new technology like cutting-edge scanners to better detect drug smuggling. \n",
"\n",
"Weve set up joint patrols with Mexico and Guatemala to catch more human traffickers. \n",
"\n",
"Were putting in place dedicated immigration judges so families fleeing persecution and violence can have their cases heard faster. \n",
"\n",
"Were securing commitments and supporting partners in South and Central America to host more refugees and secure their own borders.\n",
"--------------------------------------------------------------------------------\n"
]
}
],
"source": [
"for doc, score in docs_with_score:\n",
" print(\"-\" * 80)\n",
" print(\"Score: \", score)\n",
" print(doc.page_content)\n",
" print(\"-\" * 80)"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Working with vectorstore\n",
"\n",
"Above, we created a vectorstore from scratch. However, often times we want to work with an existing vectorstore.\n",
"In order to do that, we can initialize it directly."
]
},
{
"cell_type": "code",
"execution_count": 9,
"metadata": {},
"outputs": [],
"source": [
"index_name = \"vector\" # default index name\n",
"\n",
"store = Neo4jVector.from_existing_index(\n",
" OpenAIEmbeddings(),\n",
" url=url,\n",
" username=username,\n",
" password=password,\n",
" index_name=index_name,\n",
")"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"### Add documents\n",
"We can add documents to the existing vectorstore."
]
},
{
"cell_type": "code",
"execution_count": 10,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"['2f70679a-4416-11ee-b7c3-d46a6aa24f5b']"
]
},
"execution_count": 10,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"store.add_documents([Document(page_content=\"foo\")])"
]
},
{
"cell_type": "code",
"execution_count": 11,
"metadata": {},
"outputs": [],
"source": [
"docs_with_score = store.similarity_search_with_score(\"foo\")"
]
},
{
"cell_type": "code",
"execution_count": 12,
"metadata": {
"scrolled": true
},
"outputs": [
{
"data": {
"text/plain": [
"(Document(page_content='foo', metadata={}), 1.0)"
]
},
"execution_count": 12,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"docs_with_score[0]"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"### Retriever options\n",
"\n",
"This section shows how to use `Neo4jVector` as a retriever."
]
},
{
"cell_type": "code",
"execution_count": 13,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"Document(page_content='Tonight. I call on the Senate to: Pass the Freedom to Vote Act. Pass the John Lewis Voting Rights Act. And while youre at it, pass the Disclose Act so Americans can know who is funding our elections. \\n\\nTonight, Id like to honor someone who has dedicated his life to serve this country: Justice Stephen Breyer—an Army veteran, Constitutional scholar, and retiring Justice of the United States Supreme Court. Justice Breyer, thank you for your service. \\n\\nOne of the most serious constitutional responsibilities a President has is nominating someone to serve on the United States Supreme Court. \\n\\nAnd I did that 4 days ago, when I nominated Circuit Court of Appeals Judge Ketanji Brown Jackson. One of our nations top legal minds, who will continue Justice Breyers legacy of excellence.', metadata={'source': '../../modules/state_of_the_union.txt'})"
]
},
"execution_count": 13,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"retriever = store.as_retriever()\n",
"retriever.get_relevant_documents(query)[0]"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Question Answering with Sources\n",
"\n",
"This section goes over how to do question-answering with sources over an Index. It does this by using the `RetrievalQAWithSourcesChain`, which does the lookup of the documents from an Index. "
]
},
{
"cell_type": "code",
"execution_count": 14,
"metadata": {},
"outputs": [],
"source": [
"from langchain.chains import RetrievalQAWithSourcesChain\n",
"from langchain.chat_models import ChatOpenAI"
]
},
{
"cell_type": "code",
"execution_count": 15,
"metadata": {},
"outputs": [],
"source": [
"chain = RetrievalQAWithSourcesChain.from_chain_type(\n",
" ChatOpenAI(temperature=0), chain_type=\"stuff\", retriever=retriever\n",
")"
]
},
{
"cell_type": "code",
"execution_count": 16,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"{'answer': \"The president honored Justice Stephen Breyer, who is retiring from the United States Supreme Court, and thanked him for his service. The president also mentioned that he nominated Circuit Court of Appeals Judge Ketanji Brown Jackson to continue Justice Breyer's legacy of excellence. \\n\",\n",
" 'sources': '../../modules/state_of_the_union.txt'}"
]
},
"execution_count": 16,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"chain(\n",
" {\"question\": \"What did the president say about Justice Breyer\"},\n",
" return_only_outputs=True,\n",
")"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3 (ipykernel)",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.11.4"
}
},
"nbformat": 4,
"nbformat_minor": 4
}

@ -52,6 +52,7 @@ from langchain.vectorstores.meilisearch import Meilisearch
from langchain.vectorstores.milvus import Milvus
from langchain.vectorstores.mongodb_atlas import MongoDBAtlasVectorSearch
from langchain.vectorstores.myscale import MyScale, MyScaleSettings
from langchain.vectorstores.neo4j_vector import Neo4jVector
from langchain.vectorstores.opensearch_vector_search import OpenSearchVectorSearch
from langchain.vectorstores.pgembedding import PGEmbedding
from langchain.vectorstores.pgvector import PGVector
@ -110,6 +111,7 @@ __all__ = [
"MongoDBAtlasVectorSearch",
"MyScale",
"MyScaleSettings",
"Neo4jVector",
"OpenSearchVectorSearch",
"OpenSearchVectorSearch",
"PGEmbedding",

@ -0,0 +1,685 @@
from __future__ import annotations
import logging
import uuid
from typing import (
Any,
Callable,
Dict,
Iterable,
List,
Optional,
Tuple,
Type,
)
from langchain.docstore.document import Document
from langchain.embeddings.base import Embeddings
from langchain.utils import get_from_env
from langchain.vectorstores.base import VectorStore
from langchain.vectorstores.utils import DistanceStrategy
DEFAULT_DISTANCE_STRATEGY = DistanceStrategy.COSINE
distance_mapping = {
DistanceStrategy.EUCLIDEAN_DISTANCE: "euclidean",
DistanceStrategy.COSINE: "cosine",
}
def check_if_not_null(props: List[str], values: List[Any]) -> None:
for prop, value in zip(props, values):
if not value:
raise ValueError(f"Parameter `{prop}` must not be None or empty string")
def sort_by_index_name(
lst: List[Dict[str, Any]], index_name: str
) -> List[Dict[str, Any]]:
"""Sort first element to match the index_name if exists"""
return sorted(lst, key=lambda x: x.get("index_name") != index_name)
class Neo4jVector(VectorStore):
"""`Neo4j` vector index.
To use, you should have the ``neo4j`` python package installed.
Args:
url: Neo4j connection url
username: Neo4j username.
password: Neo4j password
database: Optionally provide Neo4j database
Defaults to "neo4j"
embedding: Any embedding function implementing
`langchain.embeddings.base.Embeddings` interface.
distance_strategy: The distance strategy to use. (default: COSINE)
pre_delete_collection: If True, will delete existing data if it exists.
(default: False). Useful for testing.
Example:
.. code-block:: python
from langchain.vectorstores.neo4j_vector import Neo4jVector
from langchain.embeddings.openai import OpenAIEmbeddings
url="bolt://localhost:7687"
username="neo4j"
password="pleaseletmein"
embeddings = OpenAIEmbeddings()
vectorestore = Neo4jVector.from_documents(
embedding=embeddings,
documents=docs,
url=url
username=username,
password=password,
)
"""
def __init__(
self,
embedding: Embeddings,
*,
username: Optional[str] = None,
password: Optional[str] = None,
url: Optional[str] = None,
database: str = "neo4j",
index_name: str = "vector",
node_label: str = "Chunk",
embedding_node_property: str = "embedding",
text_node_property: str = "text",
distance_strategy: DistanceStrategy = DEFAULT_DISTANCE_STRATEGY,
logger: Optional[logging.Logger] = None,
pre_delete_collection: bool = False,
retrieval_query: str = "",
relevance_score_fn: Optional[Callable[[float], float]] = None,
) -> None:
try:
import neo4j
except ImportError:
raise ImportError(
"Could not import neo4j python package. "
"Please install it with `pip install neo4j`."
)
# Allow only cosine and euclidean distance strategies
if distance_strategy not in [
DistanceStrategy.EUCLIDEAN_DISTANCE,
DistanceStrategy.COSINE,
]:
raise ValueError(
"distance_strategy must be either 'EUCLIDEAN_DISTANCE' or 'COSINE'"
)
# Handle if the credentials are environment variables
url = get_from_env("url", "NEO4J_URL", url)
username = get_from_env("username", "NEO4J_USERNAME", username)
password = get_from_env("password", "NEO4J_PASSWORD", password)
database = get_from_env("database", "NEO4J_DATABASE", database)
self._driver = neo4j.GraphDatabase.driver(url, auth=(username, password))
self._database = database
self.schema = ""
# Verify connection
try:
self._driver.verify_connectivity()
except neo4j.exceptions.ServiceUnavailable:
raise ValueError(
"Could not connect to Neo4j database. "
"Please ensure that the url is correct"
)
except neo4j.exceptions.AuthError:
raise ValueError(
"Could not connect to Neo4j database. "
"Please ensure that the username and password are correct"
)
# Verify if the version support vector index
self.verify_version()
# Verify that required values are not null
check_if_not_null(
[
"index_name",
"node_label",
"embedding_node_property",
"text_node_property",
],
[index_name, node_label, embedding_node_property, text_node_property],
)
self.embedding = embedding
self._distance_strategy = distance_strategy
self.index_name = index_name
self.node_label = node_label
self.embedding_node_property = embedding_node_property
self.text_node_property = text_node_property
self.logger = logger or logging.getLogger(__name__)
self.override_relevance_score_fn = relevance_score_fn
self.retrieval_query = retrieval_query
# Calculate embedding dimension
self.embedding_dimension = len(embedding.embed_query("foo"))
# Delete existing data if flagged
if pre_delete_collection:
from neo4j.exceptions import DatabaseError
self.query(
f"MATCH (n:`{self.node_label}`) "
"CALL { WITH n DETACH DELETE n } "
"IN TRANSACTIONS OF 10000 ROWS;"
)
# Delete index
try:
self.query(f"DROP INDEX {self.index_name}")
except DatabaseError: # Index didn't exist yet
pass
def query(
self, query: str, *, params: Optional[dict] = None
) -> List[Dict[str, Any]]:
"""
This method sends a Cypher query to the connected Neo4j database
and returns the results as a list of dictionaries.
Args:
query (str): The Cypher query to execute.
params (dict, optional): Dictionary of query parameters. Defaults to {}.
Returns:
List[Dict[str, Any]]: List of dictionaries containing the query results.
"""
from neo4j.exceptions import CypherSyntaxError
params = params or {}
with self._driver.session(database=self._database) as session:
try:
data = session.run(query, params)
return [r.data() for r in data]
except CypherSyntaxError as e:
raise ValueError(f"Cypher Statement is not valid\n{e}")
def verify_version(self) -> None:
"""
Check if the connected Neo4j database version supports vector indexing.
Queries the Neo4j database to retrieve its version and compares it
against a target version (5.11.0) that is known to support vector
indexing. Raises a ValueError if the connected Neo4j version is
not supported.
"""
version = self.query("CALL dbms.components()")[0]["versions"][0]
if "aura" in version:
version_tuple = tuple(map(int, version.split("-")[0].split("."))) + (0,)
else:
version_tuple = tuple(map(int, version.split(".")))
target_version = (5, 11, 0)
if version_tuple < target_version:
raise ValueError(
"Version index is only supported in Neo4j version 5.11 or greater"
)
def retrieve_existing_index(self) -> Optional[int]:
"""
Check if the vector index exists in the Neo4j database
and returns its embedding dimension.
This method queries the Neo4j database for existing indexes
and attempts to retrieve the dimension of the vector index
with the specified name. If the index exists, its dimension is returned.
If the index doesn't exist, `None` is returned.
Returns:
int or None: The embedding dimension of the existing index if found.
"""
index_information = self.query(
"SHOW INDEXES YIELD name, type, labelsOrTypes, properties, options "
"WHERE type = 'VECTOR' AND (name = $index_name "
"OR (labelsOrTypes[0] = $node_label AND "
"properties[0] = $embedding_node_property)) "
"RETURN name, labelsOrTypes, properties, options ",
params={
"index_name": self.index_name,
"node_label": self.node_label,
"embedding_node_property": self.embedding_node_property,
},
)
# sort by index_name
index_information = sort_by_index_name(index_information, self.index_name)
try:
self.index_name = index_information[0]["name"]
self.node_label = index_information[0]["labelsOrTypes"][0]
self.embedding_node_property = index_information[0]["properties"][0]
embedding_dimension = index_information[0]["options"]["indexConfig"][
"vector.dimensions"
]
return embedding_dimension
except IndexError:
return None
def create_new_index(self) -> None:
"""
This method constructs a Cypher query and executes it
to create a new vector index in Neo4j.
"""
index_query = (
"CALL db.index.vector.createNodeIndex("
"$index_name,"
"$node_label,"
"$embedding_node_property,"
"toInteger($embedding_dimension),"
"$similarity_metric )"
)
parameters = {
"index_name": self.index_name,
"node_label": self.node_label,
"embedding_node_property": self.embedding_node_property,
"embedding_dimension": self.embedding_dimension,
"similarity_metric": distance_mapping[self._distance_strategy],
}
self.query(index_query, params=parameters)
@property
def embeddings(self) -> Embeddings:
return self.embedding
@classmethod
def __from(
cls,
texts: List[str],
embeddings: List[List[float]],
embedding: Embeddings,
metadatas: Optional[List[dict]] = None,
ids: Optional[List[str]] = None,
create_id_index: bool = True,
**kwargs: Any,
) -> Neo4jVector:
if ids is None:
ids = [str(uuid.uuid1()) for _ in texts]
if not metadatas:
metadatas = [{} for _ in texts]
store = cls(
embedding=embedding,
**kwargs,
)
# Check if the index already exists
embedding_dimension = store.retrieve_existing_index()
# If the index doesn't exist yet
if not embedding_dimension:
store.create_new_index()
# If the index already exists, check if embedding dimensions match
elif not store.embedding_dimension == embedding_dimension:
raise ValueError(
f"Index with name {store.index_name} already exists."
"The provided embedding function and vector index "
"dimensions do not match.\n"
f"Embedding function dimension: {store.embedding_dimension}\n"
f"Vector index dimension: {embedding_dimension}"
)
# Create unique constraint for faster import
if create_id_index:
store.query(
"CREATE CONSTRAINT IF NOT EXISTS "
f"FOR (n:`{store.node_label}`) REQUIRE n.id IS UNIQUE;"
)
store.add_embeddings(
texts=texts, embeddings=embeddings, metadatas=metadatas, ids=ids, **kwargs
)
return store
def add_embeddings(
self,
texts: Iterable[str],
embeddings: List[List[float]],
metadatas: Optional[List[dict]] = None,
ids: Optional[List[str]] = None,
**kwargs: Any,
) -> List[str]:
"""Add embeddings to the vectorstore.
Args:
texts: Iterable of strings to add to the vectorstore.
embeddings: List of list of embedding vectors.
metadatas: List of metadatas associated with the texts.
kwargs: vectorstore specific parameters
"""
if ids is None:
ids = [str(uuid.uuid1()) for _ in texts]
if not metadatas:
metadatas = [{} for _ in texts]
import_query = (
"UNWIND $data AS row "
"CALL { WITH row "
f"MERGE (c:`{self.node_label}` {{id: row.id}}) "
"WITH c, row "
f"CALL db.create.setVectorProperty(c, "
f"'{self.embedding_node_property}', row.embedding) "
"YIELD node "
f"SET c.`{self.text_node_property}` = row.text "
"SET c += row.metadata } IN TRANSACTIONS OF 1000 ROWS"
)
parameters = {
"data": [
{"text": text, "metadata": metadata, "embedding": embedding, "id": id}
for text, metadata, embedding, id in zip(
texts, metadatas, embeddings, ids
)
]
}
self.query(import_query, params=parameters)
return ids
def add_texts(
self,
texts: Iterable[str],
metadatas: Optional[List[dict]] = None,
ids: Optional[List[str]] = None,
**kwargs: Any,
) -> List[str]:
"""Run more texts through the embeddings and add to the vectorstore.
Args:
texts: Iterable of strings to add to the vectorstore.
metadatas: Optional list of metadatas associated with the texts.
kwargs: vectorstore specific parameters
Returns:
List of ids from adding the texts into the vectorstore.
"""
embeddings = self.embedding.embed_documents(list(texts))
return self.add_embeddings(
texts=texts, embeddings=embeddings, metadatas=metadatas, ids=ids, **kwargs
)
def similarity_search(
self,
query: str,
k: int = 4,
**kwargs: Any,
) -> List[Document]:
"""Run similarity search with Neo4jVector.
Args:
query (str): Query text to search for.
k (int): Number of results to return. Defaults to 4.
Returns:
List of Documents most similar to the query.
"""
embedding = self.embedding.embed_query(text=query)
return self.similarity_search_by_vector(
embedding=embedding,
k=k,
)
def similarity_search_with_score(
self, query: str, k: int = 4
) -> List[Tuple[Document, float]]:
"""Return docs most similar to query.
Args:
query: Text to look up documents similar to.
k: Number of Documents to return. Defaults to 4.
Returns:
List of Documents most similar to the query and score for each
"""
embedding = self.embedding.embed_query(query)
docs = self.similarity_search_with_score_by_vector(embedding=embedding, k=k)
return docs
def similarity_search_with_score_by_vector(
self, embedding: List[float], k: int = 4
) -> List[Tuple[Document, float]]:
"""
Perform a similarity search in the Neo4j database using a
given vector and return the top k similar documents with their scores.
This method uses a Cypher query to find the top k documents that
are most similar to a given embedding. The similarity is measured
using a vector index in the Neo4j database. The results are returned
as a list of tuples, each containing a Document object and
its similarity score.
Args:
embedding (List[float]): The embedding vector to compare against.
k (int, optional): The number of top similar documents to retrieve.
Returns:
List[Tuple[Document, float]]: A list of tuples, each containing
a Document object and its similarity score.
"""
default_retrieval = (
f"RETURN node.`{self.text_node_property}` AS text, score, "
f"node {{.*, `{self.text_node_property}`: Null, "
f"`{self.embedding_node_property}`: Null, id: Null }} AS metadata"
)
retrieval_query = (
self.retrieval_query if self.retrieval_query else default_retrieval
)
read_query = (
"CALL db.index.vector.queryNodes($index, $k, $embedding) "
"YIELD node, score "
) + retrieval_query
parameters = {"index": self.index_name, "k": k, "embedding": embedding}
results = self.query(read_query, params=parameters)
docs = [
(
Document(
page_content=result["text"],
metadata={
k: v for k, v in result["metadata"].items() if v is not None
},
),
result["score"],
)
for result in results
]
return docs
def similarity_search_by_vector(
self,
embedding: List[float],
k: int = 4,
**kwargs: Any,
) -> List[Document]:
"""Return docs most similar to embedding vector.
Args:
embedding: Embedding to look up documents similar to.
k: Number of Documents to return. Defaults to 4.
Returns:
List of Documents most similar to the query vector.
"""
docs_and_scores = self.similarity_search_with_score_by_vector(
embedding=embedding, k=k
)
return [doc for doc, _ in docs_and_scores]
@classmethod
def from_texts(
cls: Type[Neo4jVector],
texts: List[str],
embedding: Embeddings,
metadatas: Optional[List[dict]] = None,
distance_strategy: DistanceStrategy = DEFAULT_DISTANCE_STRATEGY,
ids: Optional[List[str]] = None,
**kwargs: Any,
) -> Neo4jVector:
"""
Return Neo4jVector initialized from texts and embeddings.
Neo4j credentials are required in the form of `url`, `username`,
and `password` and optional `database` parameters.
"""
embeddings = embedding.embed_documents(list(texts))
return cls.__from(
texts,
embeddings,
embedding,
metadatas=metadatas,
ids=ids,
distance_strategy=distance_strategy,
**kwargs,
)
@classmethod
def from_embeddings(
cls,
text_embeddings: List[Tuple[str, List[float]]],
embedding: Embeddings,
metadatas: Optional[List[dict]] = None,
distance_strategy: DistanceStrategy = DEFAULT_DISTANCE_STRATEGY,
ids: Optional[List[str]] = None,
pre_delete_collection: bool = False,
**kwargs: Any,
) -> Neo4jVector:
"""Construct Neo4jVector wrapper from raw documents and pre-
generated embeddings.
Return Neo4jVector initialized from documents and embeddings.
Neo4j credentials are required in the form of `url`, `username`,
and `password` and optional `database` parameters.
Example:
.. code-block:: python
from langchain.vectorstores.neo4j_vector import Neo4jVector
from langchain.embeddings import OpenAIEmbeddings
embeddings = OpenAIEmbeddings()
text_embeddings = embeddings.embed_documents(texts)
text_embedding_pairs = list(zip(texts, text_embeddings))
vectorstore = Neo4jVector.from_embeddings(
text_embedding_pairs, embeddings)
"""
texts = [t[0] for t in text_embeddings]
embeddings = [t[1] for t in text_embeddings]
return cls.__from(
texts,
embeddings,
embedding,
metadatas=metadatas,
ids=ids,
distance_strategy=distance_strategy,
pre_delete_collection=pre_delete_collection,
**kwargs,
)
@classmethod
def from_existing_index(
cls: Type[Neo4jVector],
embedding: Embeddings,
index_name: str,
**kwargs: Any,
) -> Neo4jVector:
"""
Get instance of an existing Neo4j vector index. This method will
return the instance of the store without inserting any new
embeddings.
Neo4j credentials are required in the form of `url`, `username`,
and `password` and optional `database` parameters along with
the `index_name` definition.
"""
store = cls(
embedding=embedding,
index_name=index_name,
**kwargs,
)
embedding_dimension = store.retrieve_existing_index()
if not embedding_dimension:
raise ValueError(
"The specified vector index name does not exist. "
"Make sure to check if you spelled it correctly"
)
# Check if embedding function and vector index dimensions match
if not store.embedding_dimension == embedding_dimension:
raise ValueError(
"The provided embedding function and vector index "
"dimensions do not match.\n"
f"Embedding function dimension: {store.embedding_dimension}\n"
f"Vector index dimension: {embedding_dimension}"
)
return store
@classmethod
def from_documents(
cls: Type[Neo4jVector],
documents: List[Document],
embedding: Embeddings,
distance_strategy: DistanceStrategy = DEFAULT_DISTANCE_STRATEGY,
ids: Optional[List[str]] = None,
**kwargs: Any,
) -> Neo4jVector:
"""
Return Neo4jVector initialized from documents and embeddings.
Neo4j credentials are required in the form of `url`, `username`,
and `password` and optional `database` parameters.
"""
texts = [d.page_content for d in documents]
metadatas = [d.metadata for d in documents]
return cls.from_texts(
texts=texts,
embedding=embedding,
distance_strategy=distance_strategy,
metadatas=metadatas,
ids=ids,
**kwargs,
)
def _select_relevance_score_fn(self) -> Callable[[float], float]:
"""
The 'correct' relevance function
may differ depending on a few things, including:
- the distance / similarity metric used by the VectorStore
- the scale of your embeddings (OpenAI's are unit normed. Many others are not!)
- embedding dimensionality
- etc.
"""
if self.override_relevance_score_fn is not None:
return self.override_relevance_score_fn
# Default strategy is to rely on distance strategy provided
# in vectorstore constructor
if self._distance_strategy == DistanceStrategy.COSINE:
return lambda x: x
elif self._distance_strategy == DistanceStrategy.EUCLIDEAN_DISTANCE:
return lambda x: x
else:
raise ValueError(
"No supported normalization function"
f" for distance_strategy of {self._distance_strategy}."
"Consider providing relevance_score_fn to PGVector constructor."
)

@ -0,0 +1,12 @@
version: "3.8"
services:
neo4j:
image: neo4j:5.11.0
restart: on-failure:0
hostname: neo4j-test
container_name: neo4j-test
ports:
- 7474:7474
- 7687:7687
environment:
- NEO4J_AUTH=neo4j/pleaseletmein

@ -0,0 +1,333 @@
"""Test Neo4jVector functionality."""
import os
from typing import List
from langchain.docstore.document import Document
from langchain.vectorstores import Neo4jVector
from langchain.vectorstores.utils import DistanceStrategy
from tests.integration_tests.vectorstores.fake_embeddings import FakeEmbeddings
url = os.environ.get("NEO4J_URL", "bolt://localhost:7687")
username = os.environ.get("NEO4J_USERNAME", "neo4j")
password = os.environ.get("NEO4J_PASSWORD", "pleaseletmein")
OS_TOKEN_COUNT = 1536
texts = ["foo", "bar", "baz"]
"""
cd tests/integration_tests/vectorstores/docker-compose
docker-compose -f neo4j.yml up
"""
def drop_vector_indexes(store: Neo4jVector) -> None:
"""Cleanup all vector indexes"""
all_indexes = store.query(
"""
SHOW INDEXES YIELD name, type
WHERE type = "VECTOR"
RETURN name
"""
)
for index in all_indexes:
store.query(f"DROP INDEX {index['name']}")
class FakeEmbeddingsWithOsDimension(FakeEmbeddings):
"""Fake embeddings functionality for testing."""
def embed_documents(self, embedding_texts: List[str]) -> List[List[float]]:
"""Return simple embeddings."""
return [
[float(1.0)] * (OS_TOKEN_COUNT - 1) + [float(i + 1)]
for i in range(len(embedding_texts))
]
def embed_query(self, text: str) -> List[float]:
"""Return simple embeddings."""
return [float(1.0)] * (OS_TOKEN_COUNT - 1) + [float(texts.index(text) + 1)]
def test_neo4jvector() -> None:
"""Test end to end construction and search."""
docsearch = Neo4jVector.from_texts(
texts=texts,
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
pre_delete_collection=True,
)
output = docsearch.similarity_search("foo", k=1)
assert output == [Document(page_content="foo")]
drop_vector_indexes(docsearch)
def test_neo4jvector_euclidean() -> None:
"""Test euclidean distance"""
docsearch = Neo4jVector.from_texts(
texts=texts,
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
pre_delete_collection=True,
distance_strategy=DistanceStrategy.EUCLIDEAN_DISTANCE,
)
output = docsearch.similarity_search("foo", k=1)
assert output == [Document(page_content="foo")]
drop_vector_indexes(docsearch)
def test_neo4jvector_embeddings() -> None:
"""Test end to end construction with embeddings and search."""
text_embeddings = FakeEmbeddingsWithOsDimension().embed_documents(texts)
text_embedding_pairs = list(zip(texts, text_embeddings))
docsearch = Neo4jVector.from_embeddings(
text_embeddings=text_embedding_pairs,
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
pre_delete_collection=True,
)
output = docsearch.similarity_search("foo", k=1)
assert output == [Document(page_content="foo")]
drop_vector_indexes(docsearch)
def test_neo4jvector_catch_wrong_index_name() -> None:
"""Test if index name is misspelled, but node label and property are correct."""
text_embeddings = FakeEmbeddingsWithOsDimension().embed_documents(texts)
text_embedding_pairs = list(zip(texts, text_embeddings))
Neo4jVector.from_embeddings(
text_embeddings=text_embedding_pairs,
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
pre_delete_collection=True,
)
existing = Neo4jVector.from_existing_index(
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
index_name="test",
)
output = existing.similarity_search("foo", k=1)
assert output == [Document(page_content="foo")]
drop_vector_indexes(existing)
def test_neo4jvector_catch_wrong_node_label() -> None:
"""Test if node label is misspelled, but index name is correct."""
text_embeddings = FakeEmbeddingsWithOsDimension().embed_documents(texts)
text_embedding_pairs = list(zip(texts, text_embeddings))
Neo4jVector.from_embeddings(
text_embeddings=text_embedding_pairs,
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
pre_delete_collection=True,
)
existing = Neo4jVector.from_existing_index(
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
index_name="vector",
node_label="test",
)
output = existing.similarity_search("foo", k=1)
assert output == [Document(page_content="foo")]
drop_vector_indexes(existing)
def test_neo4jvector_with_metadatas() -> None:
"""Test end to end construction and search."""
metadatas = [{"page": str(i)} for i in range(len(texts))]
docsearch = Neo4jVector.from_texts(
texts=texts,
embedding=FakeEmbeddingsWithOsDimension(),
metadatas=metadatas,
url=url,
username=username,
password=password,
pre_delete_collection=True,
)
output = docsearch.similarity_search("foo", k=1)
assert output == [Document(page_content="foo", metadata={"page": "0"})]
drop_vector_indexes(docsearch)
def test_neo4jvector_with_metadatas_with_scores() -> None:
"""Test end to end construction and search."""
metadatas = [{"page": str(i)} for i in range(len(texts))]
docsearch = Neo4jVector.from_texts(
texts=texts,
embedding=FakeEmbeddingsWithOsDimension(),
metadatas=metadatas,
url=url,
username=username,
password=password,
pre_delete_collection=True,
)
output = docsearch.similarity_search_with_score("foo", k=1)
assert output == [(Document(page_content="foo", metadata={"page": "0"}), 1.0)]
drop_vector_indexes(docsearch)
def test_neo4jvector_relevance_score() -> None:
"""Test to make sure the relevance score is scaled to 0-1."""
metadatas = [{"page": str(i)} for i in range(len(texts))]
docsearch = Neo4jVector.from_texts(
texts=texts,
embedding=FakeEmbeddingsWithOsDimension(),
metadatas=metadatas,
url=url,
username=username,
password=password,
pre_delete_collection=True,
)
output = docsearch.similarity_search_with_relevance_scores("foo", k=3)
assert output == [
(Document(page_content="foo", metadata={"page": "0"}), 1.0),
(Document(page_content="bar", metadata={"page": "1"}), 0.9998376369476318),
(Document(page_content="baz", metadata={"page": "2"}), 0.9993523359298706),
]
drop_vector_indexes(docsearch)
def test_neo4jvector_retriever_search_threshold() -> None:
"""Test using retriever for searching with threshold."""
metadatas = [{"page": str(i)} for i in range(len(texts))]
docsearch = Neo4jVector.from_texts(
texts=texts,
embedding=FakeEmbeddingsWithOsDimension(),
metadatas=metadatas,
url=url,
username=username,
password=password,
pre_delete_collection=True,
)
retriever = docsearch.as_retriever(
search_type="similarity_score_threshold",
search_kwargs={"k": 3, "score_threshold": 0.9999},
)
output = retriever.get_relevant_documents("foo")
assert output == [
Document(page_content="foo", metadata={"page": "0"}),
]
drop_vector_indexes(docsearch)
def test_custom_return_neo4jvector() -> None:
"""Test end to end construction and search."""
docsearch = Neo4jVector.from_texts(
texts=["test"],
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
pre_delete_collection=True,
retrieval_query="RETURN 'foo' AS text, score, {test: 'test'} AS metadata",
)
output = docsearch.similarity_search("foo", k=1)
assert output == [Document(page_content="foo", metadata={"test": "test"})]
drop_vector_indexes(docsearch)
def test_neo4jvector_prefer_indexname() -> None:
"""Test using when two indexes are found, prefer by index_name."""
Neo4jVector.from_texts(
texts=["foo"],
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
pre_delete_collection=True,
)
Neo4jVector.from_texts(
texts=["bar"],
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
index_name="foo",
node_label="Test",
embedding_node_property="vector",
text_node_property="info",
pre_delete_collection=True,
)
existing_index = Neo4jVector.from_existing_index(
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
index_name="foo",
text_node_property="info",
)
output = existing_index.similarity_search("bar", k=1)
assert output == [Document(page_content="bar", metadata={})]
drop_vector_indexes(existing_index)
def test_neo4jvector_prefer_indexname_insert() -> None:
"""Test using when two indexes are found, prefer by index_name."""
Neo4jVector.from_texts(
texts=["baz"],
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
pre_delete_collection=True,
)
Neo4jVector.from_texts(
texts=["foo"],
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
index_name="foo",
node_label="Test",
embedding_node_property="vector",
text_node_property="info",
pre_delete_collection=True,
)
existing_index = Neo4jVector.from_existing_index(
embedding=FakeEmbeddingsWithOsDimension(),
url=url,
username=username,
password=password,
index_name="foo",
text_node_property="info",
)
existing_index.add_documents([Document(page_content="bar", metadata={})])
output = existing_index.similarity_search("bar", k=2)
assert output == [
Document(page_content="bar", metadata={}),
Document(page_content="foo", metadata={}),
]
drop_vector_indexes(existing_index)
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