Add Xorbits Dataframe as a Document Loader (#7319)

- [Xorbits](https://doc.xorbits.io/en/latest/) is an open-source
computing framework that makes it easy to scale data science and machine
learning workloads in parallel. Xorbits can leverage multi cores or GPUs
to accelerate computation on a single machine, or scale out up to
thousands of machines to support processing terabytes of data.

- This PR added support for the Xorbits document loader, which allows
langchain to leverage Xorbits to parallelize and distribute the loading
of data.
- Dependencies: This change requires the Xorbits library to be installed
in order to be used.
`pip install xorbits`
- Request for review: @rlancemartin, @eyurtsev
- Twitter handle: https://twitter.com/Xorbitsio

Co-authored-by: Bagatur <baskaryan@gmail.com>
pull/7467/head
Yifei Song 12 months ago committed by GitHub
parent 21a353e9c2
commit 7d29bb2c02
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GPG Key ID: 4AEE18F83AFDEB23

@ -660,6 +660,7 @@ Classes
document_loaders.word_document.Docx2txtLoader
document_loaders.word_document.UnstructuredWordDocumentLoader
document_loaders.xml.UnstructuredXMLLoader
document_loaders.xorbits.XorbitsLoader
document_loaders.youtube.GoogleApiYoutubeLoader
document_loaders.youtube.YoutubeLoader

@ -0,0 +1,304 @@
{
"cells": [
{
"attachments": {},
"cell_type": "markdown",
"metadata": {},
"source": [
"# Xorbits Pandas DataFrame\n",
"\n",
"This notebook goes over how to load data from a [xorbits.pandas](https://doc.xorbits.io/en/latest/reference/pandas/frame.html) DataFrame."
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [],
"source": [
"#!pip install xorbits"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [],
"source": [
"import xorbits.pandas as pd"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {},
"outputs": [],
"source": [
"df = pd.read_csv(\"example_data/mlb_teams_2012.csv\")"
]
},
{
"cell_type": "code",
"execution_count": 9,
"metadata": {},
"outputs": [
{
"data": {
"application/vnd.jupyter.widget-view+json": {
"model_id": "b0d1d84e23c04f1296f63b3ea3dd1e5b",
"version_major": 2,
"version_minor": 0
},
"text/plain": [
" 0%| | 0.00/100 [00:00<?, ?it/s]"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
"text/html": [
"<div>\n",
"<style scoped>\n",
" .dataframe tbody tr th:only-of-type {\n",
" vertical-align: middle;\n",
" }\n",
"\n",
" .dataframe tbody tr th {\n",
" vertical-align: top;\n",
" }\n",
"\n",
" .dataframe thead th {\n",
" text-align: right;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>Team</th>\n",
" <th>\"Payroll (millions)\"</th>\n",
" <th>\"Wins\"</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
" <td>Nationals</td>\n",
" <td>81.34</td>\n",
" <td>98</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1</th>\n",
" <td>Reds</td>\n",
" <td>82.20</td>\n",
" <td>97</td>\n",
" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
" <td>Yankees</td>\n",
" <td>197.96</td>\n",
" <td>95</td>\n",
" </tr>\n",
" <tr>\n",
" <th>3</th>\n",
" <td>Giants</td>\n",
" <td>117.62</td>\n",
" <td>94</td>\n",
" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
" <td>Braves</td>\n",
" <td>83.31</td>\n",
" <td>94</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" Team \"Payroll (millions)\" \"Wins\"\n",
"0 Nationals 81.34 98\n",
"1 Reds 82.20 97\n",
"2 Yankees 197.96 95\n",
"3 Giants 117.62 94\n",
"4 Braves 83.31 94"
]
},
"execution_count": 9,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"df.head()"
]
},
{
"cell_type": "code",
"execution_count": 5,
"metadata": {},
"outputs": [],
"source": [
"from langchain.document_loaders import XorbitsLoader"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {},
"outputs": [],
"source": [
"loader = XorbitsLoader(df, page_content_column=\"Team\")"
]
},
{
"cell_type": "code",
"execution_count": 7,
"metadata": {},
"outputs": [
{
"data": {
"application/vnd.jupyter.widget-view+json": {
"model_id": "c8c8b67f1aae4a3c9de7734bb6cf738e",
"version_major": 2,
"version_minor": 0
},
"text/plain": [
" 0%| | 0.00/100 [00:00<?, ?it/s]"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
"text/plain": [
"[Document(page_content='Nationals', metadata={' \"Payroll (millions)\"': 81.34, ' \"Wins\"': 98}),\n",
" Document(page_content='Reds', metadata={' \"Payroll (millions)\"': 82.2, ' \"Wins\"': 97}),\n",
" Document(page_content='Yankees', metadata={' \"Payroll (millions)\"': 197.96, ' \"Wins\"': 95}),\n",
" Document(page_content='Giants', metadata={' \"Payroll (millions)\"': 117.62, ' \"Wins\"': 94}),\n",
" Document(page_content='Braves', metadata={' \"Payroll (millions)\"': 83.31, ' \"Wins\"': 94}),\n",
" Document(page_content='Athletics', metadata={' \"Payroll (millions)\"': 55.37, ' \"Wins\"': 94}),\n",
" Document(page_content='Rangers', metadata={' \"Payroll (millions)\"': 120.51, ' \"Wins\"': 93}),\n",
" Document(page_content='Orioles', metadata={' \"Payroll (millions)\"': 81.43, ' \"Wins\"': 93}),\n",
" Document(page_content='Rays', metadata={' \"Payroll (millions)\"': 64.17, ' \"Wins\"': 90}),\n",
" Document(page_content='Angels', metadata={' \"Payroll (millions)\"': 154.49, ' \"Wins\"': 89}),\n",
" Document(page_content='Tigers', metadata={' \"Payroll (millions)\"': 132.3, ' \"Wins\"': 88}),\n",
" Document(page_content='Cardinals', metadata={' \"Payroll (millions)\"': 110.3, ' \"Wins\"': 88}),\n",
" Document(page_content='Dodgers', metadata={' \"Payroll (millions)\"': 95.14, ' \"Wins\"': 86}),\n",
" Document(page_content='White Sox', metadata={' \"Payroll (millions)\"': 96.92, ' \"Wins\"': 85}),\n",
" Document(page_content='Brewers', metadata={' \"Payroll (millions)\"': 97.65, ' \"Wins\"': 83}),\n",
" Document(page_content='Phillies', metadata={' \"Payroll (millions)\"': 174.54, ' \"Wins\"': 81}),\n",
" Document(page_content='Diamondbacks', metadata={' \"Payroll (millions)\"': 74.28, ' \"Wins\"': 81}),\n",
" Document(page_content='Pirates', metadata={' \"Payroll (millions)\"': 63.43, ' \"Wins\"': 79}),\n",
" Document(page_content='Padres', metadata={' \"Payroll (millions)\"': 55.24, ' \"Wins\"': 76}),\n",
" Document(page_content='Mariners', metadata={' \"Payroll (millions)\"': 81.97, ' \"Wins\"': 75}),\n",
" Document(page_content='Mets', metadata={' \"Payroll (millions)\"': 93.35, ' \"Wins\"': 74}),\n",
" Document(page_content='Blue Jays', metadata={' \"Payroll (millions)\"': 75.48, ' \"Wins\"': 73}),\n",
" Document(page_content='Royals', metadata={' \"Payroll (millions)\"': 60.91, ' \"Wins\"': 72}),\n",
" Document(page_content='Marlins', metadata={' \"Payroll (millions)\"': 118.07, ' \"Wins\"': 69}),\n",
" Document(page_content='Red Sox', metadata={' \"Payroll (millions)\"': 173.18, ' \"Wins\"': 69}),\n",
" Document(page_content='Indians', metadata={' \"Payroll (millions)\"': 78.43, ' \"Wins\"': 68}),\n",
" Document(page_content='Twins', metadata={' \"Payroll (millions)\"': 94.08, ' \"Wins\"': 66}),\n",
" Document(page_content='Rockies', metadata={' \"Payroll (millions)\"': 78.06, ' \"Wins\"': 64}),\n",
" Document(page_content='Cubs', metadata={' \"Payroll (millions)\"': 88.19, ' \"Wins\"': 61}),\n",
" Document(page_content='Astros', metadata={' \"Payroll (millions)\"': 60.65, ' \"Wins\"': 55})]"
]
},
"execution_count": 7,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"loader.load()"
]
},
{
"cell_type": "code",
"execution_count": 8,
"metadata": {},
"outputs": [
{
"data": {
"application/vnd.jupyter.widget-view+json": {
"model_id": "fc85c9f59b3644689d05853159fbd358",
"version_major": 2,
"version_minor": 0
},
"text/plain": [
" 0%| | 0.00/100 [00:00<?, ?it/s]"
]
},
"metadata": {},
"output_type": "display_data"
},
{
"name": "stdout",
"output_type": "stream",
"text": [
"page_content='Nationals' metadata={' \"Payroll (millions)\"': 81.34, ' \"Wins\"': 98}\n",
"page_content='Reds' metadata={' \"Payroll (millions)\"': 82.2, ' \"Wins\"': 97}\n",
"page_content='Yankees' metadata={' \"Payroll (millions)\"': 197.96, ' \"Wins\"': 95}\n",
"page_content='Giants' metadata={' \"Payroll (millions)\"': 117.62, ' \"Wins\"': 94}\n",
"page_content='Braves' metadata={' \"Payroll (millions)\"': 83.31, ' \"Wins\"': 94}\n",
"page_content='Athletics' metadata={' \"Payroll (millions)\"': 55.37, ' \"Wins\"': 94}\n",
"page_content='Rangers' metadata={' \"Payroll (millions)\"': 120.51, ' \"Wins\"': 93}\n",
"page_content='Orioles' metadata={' \"Payroll (millions)\"': 81.43, ' \"Wins\"': 93}\n",
"page_content='Rays' metadata={' \"Payroll (millions)\"': 64.17, ' \"Wins\"': 90}\n",
"page_content='Angels' metadata={' \"Payroll (millions)\"': 154.49, ' \"Wins\"': 89}\n",
"page_content='Tigers' metadata={' \"Payroll (millions)\"': 132.3, ' \"Wins\"': 88}\n",
"page_content='Cardinals' metadata={' \"Payroll (millions)\"': 110.3, ' \"Wins\"': 88}\n",
"page_content='Dodgers' metadata={' \"Payroll (millions)\"': 95.14, ' \"Wins\"': 86}\n",
"page_content='White Sox' metadata={' \"Payroll (millions)\"': 96.92, ' \"Wins\"': 85}\n",
"page_content='Brewers' metadata={' \"Payroll (millions)\"': 97.65, ' \"Wins\"': 83}\n",
"page_content='Phillies' metadata={' \"Payroll (millions)\"': 174.54, ' \"Wins\"': 81}\n",
"page_content='Diamondbacks' metadata={' \"Payroll (millions)\"': 74.28, ' \"Wins\"': 81}\n",
"page_content='Pirates' metadata={' \"Payroll (millions)\"': 63.43, ' \"Wins\"': 79}\n",
"page_content='Padres' metadata={' \"Payroll (millions)\"': 55.24, ' \"Wins\"': 76}\n",
"page_content='Mariners' metadata={' \"Payroll (millions)\"': 81.97, ' \"Wins\"': 75}\n",
"page_content='Mets' metadata={' \"Payroll (millions)\"': 93.35, ' \"Wins\"': 74}\n",
"page_content='Blue Jays' metadata={' \"Payroll (millions)\"': 75.48, ' \"Wins\"': 73}\n",
"page_content='Royals' metadata={' \"Payroll (millions)\"': 60.91, ' \"Wins\"': 72}\n",
"page_content='Marlins' metadata={' \"Payroll (millions)\"': 118.07, ' \"Wins\"': 69}\n",
"page_content='Red Sox' metadata={' \"Payroll (millions)\"': 173.18, ' \"Wins\"': 69}\n",
"page_content='Indians' metadata={' \"Payroll (millions)\"': 78.43, ' \"Wins\"': 68}\n",
"page_content='Twins' metadata={' \"Payroll (millions)\"': 94.08, ' \"Wins\"': 66}\n",
"page_content='Rockies' metadata={' \"Payroll (millions)\"': 78.06, ' \"Wins\"': 64}\n",
"page_content='Cubs' metadata={' \"Payroll (millions)\"': 88.19, ' \"Wins\"': 61}\n",
"page_content='Astros' metadata={' \"Payroll (millions)\"': 60.65, ' \"Wins\"': 55}\n"
]
}
],
"source": [
"# Use lazy load for larger table, which won't read the full table into memory\n",
"for i in loader.lazy_load():\n",
" print(i)"
]
}
],
"metadata": {
"kernelspec": {
"display_name": "base",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.9.13"
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"orig_nbformat": 4
},
"nbformat": 4,
"nbformat_minor": 2
}

@ -142,6 +142,7 @@ from langchain.document_loaders.word_document import (
UnstructuredWordDocumentLoader,
)
from langchain.document_loaders.xml import UnstructuredXMLLoader
from langchain.document_loaders.xorbits import XorbitsLoader
from langchain.document_loaders.youtube import (
GoogleApiClient,
GoogleApiYoutubeLoader,
@ -287,6 +288,7 @@ __all__ = [
"WebBaseLoader",
"WhatsAppChatLoader",
"WikipediaLoader",
"XorbitsLoader",
"YoutubeAudioLoader",
"YoutubeLoader",
]

@ -0,0 +1,46 @@
from typing import Any, Iterator, List
from langchain.docstore.document import Document
from langchain.document_loaders.base import BaseLoader
class XorbitsLoader(BaseLoader):
"""Load Xorbits DataFrame."""
def __init__(self, data_frame: Any, page_content_column: str = "text"):
"""Initialize with dataframe object.
Requirements:
Must have xorbits installed. You can install with `pip install xorbits`.
Args:
data_frame: Xorbits DataFrame object.
page_content_column: Name of the column containing the page content.
Defaults to "text".
"""
try:
import xorbits.pandas as pd
except ImportError as e:
raise ImportError(
"Cannot import xorbits, please install with 'pip install xorbits'."
) from e
if not isinstance(data_frame, pd.DataFrame):
raise ValueError(
f"Expected data_frame to be a xorbits.pandas.DataFrame, \
got {type(data_frame)}"
)
self.data_frame = data_frame
self.page_content_column = page_content_column
def lazy_load(self) -> Iterator[Document]:
"""Lazy load records from dataframe."""
for _, row in self.data_frame.iterrows():
text = row[self.page_content_column]
metadata = row.to_dict()
metadata.pop(self.page_content_column)
yield Document(page_content=text, metadata=metadata)
def load(self) -> List[Document]:
"""Load full dataframe."""
return list(self.lazy_load())

@ -349,6 +349,7 @@ extended_testing = [
"pyspark",
"openai",
"rapidfuzz"
]
[[tool.poetry.source]]

@ -0,0 +1,64 @@
import pytest
from langchain.document_loaders import XorbitsLoader
from langchain.schema import Document
try:
import xorbits # noqa: F401
xorbits_installed = True
except ImportError:
xorbits_installed = False
@pytest.mark.skipif(not xorbits_installed, reason="xorbits not installed")
def test_load_returns_list_of_documents() -> None:
import xorbits.pandas as pd
data = {
"text": ["Hello", "World"],
"author": ["Alice", "Bob"],
"date": ["2022-01-01", "2022-01-02"],
}
loader = XorbitsLoader(pd.DataFrame(data))
docs = loader.load()
assert isinstance(docs, list)
assert all(isinstance(doc, Document) for doc in docs)
assert len(docs) == 2
@pytest.mark.skipif(not xorbits_installed, reason="xorbits not installed")
def test_load_converts_dataframe_columns_to_document_metadata() -> None:
import xorbits.pandas as pd
data = {
"text": ["Hello", "World"],
"author": ["Alice", "Bob"],
"date": ["2022-01-01", "2022-01-02"],
}
loader = XorbitsLoader(pd.DataFrame(data))
docs = loader.load()
expected = {
"author": ["Alice", "Bob"],
"date": ["2022-01-01", "2022-01-02"],
}
for i, doc in enumerate(docs):
assert doc.metadata["author"] == expected["author"][i]
assert doc.metadata["date"] == expected["date"][i]
@pytest.mark.skipif(not xorbits_installed, reason="xorbits not installed")
def test_load_uses_page_content_column_to_create_document_text() -> None:
import xorbits.pandas as pd
data = {
"text": ["Hello", "World"],
"author": ["Alice", "Bob"],
"date": ["2022-01-01", "2022-01-02"],
}
sample_data_frame = pd.DataFrame(data)
sample_data_frame = sample_data_frame.rename(columns={"text": "dummy_test_column"})
loader = XorbitsLoader(sample_data_frame, page_content_column="dummy_test_column")
docs = loader.load()
assert docs[0].page_content == "Hello"
assert docs[1].page_content == "World"
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