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langchain/docs/extras/integrations/vectorstores/mongodb_atlas.ipynb

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{
Fix `make docs_build` and related scripts (#7276) **Description: a description of the change** Fixed `make docs_build` and related scripts which caused errors. There are several changes. First, I made the build of the documentation and the API Reference into two separate commands. This is because it takes less time to build. The commands for documents are `make docs_build`, `make docs_clean`, and `make docs_linkcheck`. The commands for API Reference are `make api_docs_build`, `api_docs_clean`, and `api_docs_linkcheck`. It looked like `docs/.local_build.sh` could be used to build the documentation, so I used that. Since `.local_build.sh` was also building API Rerefence internally, I removed that process. `.local_build.sh` also added some Bash options to stop in error or so. Futher more added `cd "${SCRIPT_DIR}"` at the beginning so that the script will work no matter which directory it is executed in. `docs/api_reference/api_reference.rst` is removed, because which is generated by `docs/api_reference/create_api_rst.py`, and added it to .gitignore. Finally, the description of CONTRIBUTING.md was modified. **Issue: the issue # it fixes (if applicable)** https://github.com/hwchase17/langchain/issues/6413 **Dependencies: any dependencies required for this change** `nbdoc` was missing in group docs so it was added. I installed it with the `poetry add --group docs nbdoc` command. I am concerned if any modifications are needed to poetry.lock. I would greatly appreciate it if you could pay close attention to this file during the review. **Tag maintainer** - General / Misc / if you don't know who to tag: @baskaryan If this PR needs any additional changes, I'll be happy to make them! --------- Co-authored-by: Bagatur <baskaryan@gmail.com>
1 year ago
"cells": [
{
"cell_type": "markdown",
"id": "683953b3",
"metadata": {},
"source": [
"# MongoDB Atlas\n",
"\n",
">[MongoDB Atlas](https://www.mongodb.com/docs/atlas/) is a fully-managed cloud database available in AWS, Azure, and GCP. It now has support for native Vector Search on your MongoDB document data.\n",
Fix `make docs_build` and related scripts (#7276) **Description: a description of the change** Fixed `make docs_build` and related scripts which caused errors. There are several changes. First, I made the build of the documentation and the API Reference into two separate commands. This is because it takes less time to build. The commands for documents are `make docs_build`, `make docs_clean`, and `make docs_linkcheck`. The commands for API Reference are `make api_docs_build`, `api_docs_clean`, and `api_docs_linkcheck`. It looked like `docs/.local_build.sh` could be used to build the documentation, so I used that. Since `.local_build.sh` was also building API Rerefence internally, I removed that process. `.local_build.sh` also added some Bash options to stop in error or so. Futher more added `cd "${SCRIPT_DIR}"` at the beginning so that the script will work no matter which directory it is executed in. `docs/api_reference/api_reference.rst` is removed, because which is generated by `docs/api_reference/create_api_rst.py`, and added it to .gitignore. Finally, the description of CONTRIBUTING.md was modified. **Issue: the issue # it fixes (if applicable)** https://github.com/hwchase17/langchain/issues/6413 **Dependencies: any dependencies required for this change** `nbdoc` was missing in group docs so it was added. I installed it with the `poetry add --group docs nbdoc` command. I am concerned if any modifications are needed to poetry.lock. I would greatly appreciate it if you could pay close attention to this file during the review. **Tag maintainer** - General / Misc / if you don't know who to tag: @baskaryan If this PR needs any additional changes, I'll be happy to make them! --------- Co-authored-by: Bagatur <baskaryan@gmail.com>
1 year ago
"\n",
"This notebook shows how to use `MongoDB Atlas Vector Search` to store your embeddings in MongoDB documents, create a vector search index, and perform KNN search with an approximate nearest neighbor algorithm.\n",
"\n",
"It uses the [knnBeta Operator](https://www.mongodb.com/docs/atlas/atlas-search/knn-beta) available in MongoDB Atlas Search. This feature is in Public Preview and available for evaluation purposes, to validate functionality, and to gather feedback from public preview users. It is not recommended for production deployments as we may introduce breaking changes.\n",
"\n",
"To use MongoDB Atlas, you must first deploy a cluster. We have a Forever-Free tier of clusters available. \n",
"To get started head over to Atlas here: [quick start](https://www.mongodb.com/docs/atlas/getting-started/)."
]
},
{
"cell_type": "code",
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"id": "b4c41cad-08ef-4f72-a545-2151e4598efe",
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Fix `make docs_build` and related scripts (#7276) **Description: a description of the change** Fixed `make docs_build` and related scripts which caused errors. There are several changes. First, I made the build of the documentation and the API Reference into two separate commands. This is because it takes less time to build. The commands for documents are `make docs_build`, `make docs_clean`, and `make docs_linkcheck`. The commands for API Reference are `make api_docs_build`, `api_docs_clean`, and `api_docs_linkcheck`. It looked like `docs/.local_build.sh` could be used to build the documentation, so I used that. Since `.local_build.sh` was also building API Rerefence internally, I removed that process. `.local_build.sh` also added some Bash options to stop in error or so. Futher more added `cd "${SCRIPT_DIR}"` at the beginning so that the script will work no matter which directory it is executed in. `docs/api_reference/api_reference.rst` is removed, because which is generated by `docs/api_reference/create_api_rst.py`, and added it to .gitignore. Finally, the description of CONTRIBUTING.md was modified. **Issue: the issue # it fixes (if applicable)** https://github.com/hwchase17/langchain/issues/6413 **Dependencies: any dependencies required for this change** `nbdoc` was missing in group docs so it was added. I installed it with the `poetry add --group docs nbdoc` command. I am concerned if any modifications are needed to poetry.lock. I would greatly appreciate it if you could pay close attention to this file during the review. **Tag maintainer** - General / Misc / if you don't know who to tag: @baskaryan If this PR needs any additional changes, I'll be happy to make them! --------- Co-authored-by: Bagatur <baskaryan@gmail.com>
1 year ago
"outputs": [],
"source": [
"!pip install pymongo"
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "c1e38361-c1fe-4ac6-86e9-c90ebaf7ae87",
"metadata": {},
"outputs": [],
"source": [
"import os\n",
"import getpass\n",
"\n",
"MONGODB_ATLAS_CLUSTER_URI = getpass.getpass(\"MongoDB Atlas Cluster URI:\")"
]
},
{
"cell_type": "markdown",
"id": "457ace44-1d95-4001-9dd5-78811ab208ad",
"metadata": {},
"source": [
"We want to use `OpenAIEmbeddings` so we need to set up our OpenAI API Key. "
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "2d8f240d",
"metadata": {},
"outputs": [],
"source": [
"os.environ[\"OPENAI_API_KEY\"] = getpass.getpass(\"OpenAI API Key:\")"
]
},
{
"cell_type": "markdown",
"id": "1f3ecc42",
"metadata": {},
"source": [
"Now, let's create a vector search index on your cluster. In the below example, `embedding` is the name of the field that contains the embedding vector. Please refer to the [documentation](https://www.mongodb.com/docs/atlas/atlas-search/define-field-mappings-for-vector-search) to get more details on how to define an Atlas Vector Search index.\n",
"You can name the index `langchain_demo` and create the index on the namespace `lanchain_db.langchain_col`. Finally, write the following definition in the JSON editor on MongoDB Atlas:\n",
"\n",
"```json\n",
"{\n",
" \"mappings\": {\n",
" \"dynamic\": true,\n",
" \"fields\": {\n",
" \"embedding\": {\n",
" \"dimensions\": 1536,\n",
" \"similarity\": \"cosine\",\n",
" \"type\": \"knnVector\"\n",
" }\n",
" }\n",
" }\n",
"}\n",
"```"
]
},
{
"cell_type": "code",
"execution_count": 2,
"id": "aac9563e",
"metadata": {
"tags": []
},
"outputs": [],
"source": [
"from langchain.embeddings.openai import OpenAIEmbeddings\n",
"from langchain.text_splitter import CharacterTextSplitter\n",
"from langchain.vectorstores import MongoDBAtlasVectorSearch\n",
"from langchain.document_loaders import TextLoader\n",
"\n",
"loader = TextLoader(\"../../../state_of_the_union.txt\")\n",
"documents = loader.load()\n",
"text_splitter = CharacterTextSplitter(chunk_size=1000, chunk_overlap=0)\n",
"docs = text_splitter.split_documents(documents)\n",
"\n",
"embeddings = OpenAIEmbeddings()"
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "6e104aee",
"metadata": {},
"outputs": [],
"source": [
"from pymongo import MongoClient\n",
"\n",
"# initialize MongoDB python client\n",
"client = MongoClient(MONGODB_ATLAS_CLUSTER_URI)\n",
"\n",
"db_name = \"langchain_db\"\n",
"collection_name = \"langchain_col\"\n",
"collection = client[db_name][collection_name]\n",
"index_name = \"langchain_demo\"\n",
"\n",
"# insert the documents in MongoDB Atlas with their embedding\n",
"docsearch = MongoDBAtlasVectorSearch.from_documents(\n",
" docs, embeddings, collection=collection, index_name=index_name\n",
")\n",
"\n",
"# perform a similarity search between the embedding of the query and the embeddings of the documents\n",
"query = \"What did the president say about Ketanji Brown Jackson\"\n",
"docs = docsearch.similarity_search(query)"
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "9c608226",
"metadata": {},
"outputs": [],
"source": [
"print(docs[0].page_content)"
]
},
{
"cell_type": "markdown",
"id": "851a2ec9-9390-49a4-8412-3e132c9f789d",
"metadata": {},
"source": [
"You can also instantiate the vector store directly and execute a query as follows:"
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "6336fe79-3e73-48be-b20a-0ff1bb6a4399",
"metadata": {},
"outputs": [],
"source": [
"# initialize vector store\n",
"vectorstore = MongoDBAtlasVectorSearch(\n",
" collection, OpenAIEmbeddings(), index_name=index_name\n",
")\n",
"\n",
"# perform a similarity search between a query and the ingested documents\n",
"query = \"What did the president say about Ketanji Brown Jackson\"\n",
"docs = vectorstore.similarity_search(query)\n",
"\n",
"print(docs[0].page_content)"
]
}
],
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"display_name": "Python 3 (ipykernel)",
"language": "python",
"name": "python3"
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"file_extension": ".py",
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"version": "3.10.12"
Fix `make docs_build` and related scripts (#7276) **Description: a description of the change** Fixed `make docs_build` and related scripts which caused errors. There are several changes. First, I made the build of the documentation and the API Reference into two separate commands. This is because it takes less time to build. The commands for documents are `make docs_build`, `make docs_clean`, and `make docs_linkcheck`. The commands for API Reference are `make api_docs_build`, `api_docs_clean`, and `api_docs_linkcheck`. It looked like `docs/.local_build.sh` could be used to build the documentation, so I used that. Since `.local_build.sh` was also building API Rerefence internally, I removed that process. `.local_build.sh` also added some Bash options to stop in error or so. Futher more added `cd "${SCRIPT_DIR}"` at the beginning so that the script will work no matter which directory it is executed in. `docs/api_reference/api_reference.rst` is removed, because which is generated by `docs/api_reference/create_api_rst.py`, and added it to .gitignore. Finally, the description of CONTRIBUTING.md was modified. **Issue: the issue # it fixes (if applicable)** https://github.com/hwchase17/langchain/issues/6413 **Dependencies: any dependencies required for this change** `nbdoc` was missing in group docs so it was added. I installed it with the `poetry add --group docs nbdoc` command. I am concerned if any modifications are needed to poetry.lock. I would greatly appreciate it if you could pay close attention to this file during the review. **Tag maintainer** - General / Misc / if you don't know who to tag: @baskaryan If this PR needs any additional changes, I'll be happy to make them! --------- Co-authored-by: Bagatur <baskaryan@gmail.com>
1 year ago
}
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