2024-01-29 16:35:42 +00:00
|
|
|
import importlib
|
|
|
|
import os
|
|
|
|
import tempfile
|
|
|
|
from pathlib import Path
|
|
|
|
from typing import Any, Dict, Iterable, List, Optional, Tuple, Union
|
|
|
|
|
|
|
|
from langchain_core.documents import Document
|
|
|
|
from langchain_core.embeddings import Embeddings
|
|
|
|
from langchain_core.pydantic_v1 import Extra, root_validator
|
|
|
|
from langchain_core.utils import convert_to_secret_str, get_from_dict_or_env
|
|
|
|
from langchain_core.vectorstores import VectorStore
|
|
|
|
|
|
|
|
|
|
|
|
class NeuralDBVectorStore(VectorStore):
|
2024-02-22 17:05:01 +00:00
|
|
|
"""Vectorstore that uses ThirdAI's NeuralDB.
|
|
|
|
|
|
|
|
To use, you should have the ``thirdai[neural_db]`` python package installed.
|
|
|
|
|
|
|
|
Example:
|
|
|
|
.. code-block:: python
|
|
|
|
|
|
|
|
from langchain_community.vectorstores import NeuralDBVectorStore
|
|
|
|
from thirdai import neural_db as ndb
|
|
|
|
|
|
|
|
db = ndb.NeuralDB()
|
|
|
|
vectorstore = NeuralDBVectorStore(db=db)
|
|
|
|
"""
|
|
|
|
|
2024-02-22 23:15:27 +00:00
|
|
|
def __init__(self, db: Any) -> None:
|
2024-02-22 17:05:01 +00:00
|
|
|
self.db = db
|
2024-01-29 16:35:42 +00:00
|
|
|
|
|
|
|
db: Any = None #: :meta private:
|
|
|
|
"""NeuralDB instance"""
|
|
|
|
|
|
|
|
class Config:
|
|
|
|
"""Configuration for this pydantic object."""
|
|
|
|
|
|
|
|
extra = Extra.forbid
|
|
|
|
underscore_attrs_are_private = True
|
|
|
|
|
|
|
|
@staticmethod
|
2024-02-05 19:22:06 +00:00
|
|
|
def _verify_thirdai_library(thirdai_key: Optional[str] = None): # type: ignore[no-untyped-def]
|
2024-01-29 16:35:42 +00:00
|
|
|
try:
|
|
|
|
from thirdai import licensing
|
|
|
|
|
|
|
|
importlib.util.find_spec("thirdai.neural_db")
|
|
|
|
|
|
|
|
licensing.activate(thirdai_key or os.getenv("THIRDAI_KEY"))
|
|
|
|
except ImportError:
|
|
|
|
raise ModuleNotFoundError(
|
|
|
|
"Could not import thirdai python package and neuraldb dependencies. "
|
|
|
|
"Please install it with `pip install thirdai[neural_db]`."
|
|
|
|
)
|
|
|
|
|
|
|
|
@classmethod
|
2024-02-05 19:22:06 +00:00
|
|
|
def from_scratch( # type: ignore[no-untyped-def, no-untyped-def]
|
2024-01-29 16:35:42 +00:00
|
|
|
cls,
|
|
|
|
thirdai_key: Optional[str] = None,
|
|
|
|
**model_kwargs,
|
|
|
|
):
|
|
|
|
"""
|
|
|
|
Create a NeuralDBVectorStore from scratch.
|
|
|
|
|
|
|
|
To use, set the ``THIRDAI_KEY`` environment variable with your ThirdAI
|
|
|
|
API key, or pass ``thirdai_key`` as a named parameter.
|
|
|
|
|
|
|
|
Example:
|
|
|
|
.. code-block:: python
|
|
|
|
|
|
|
|
from langchain_community.vectorstores import NeuralDBVectorStore
|
|
|
|
|
|
|
|
vectorstore = NeuralDBVectorStore.from_scratch(
|
|
|
|
thirdai_key="your-thirdai-key",
|
|
|
|
)
|
|
|
|
|
|
|
|
vectorstore.insert([
|
|
|
|
"/path/to/doc.pdf",
|
|
|
|
"/path/to/doc.docx",
|
|
|
|
"/path/to/doc.csv",
|
|
|
|
])
|
|
|
|
|
|
|
|
documents = vectorstore.similarity_search("AI-driven music therapy")
|
|
|
|
"""
|
|
|
|
NeuralDBVectorStore._verify_thirdai_library(thirdai_key)
|
|
|
|
from thirdai import neural_db as ndb
|
|
|
|
|
2024-02-05 19:22:06 +00:00
|
|
|
return cls(db=ndb.NeuralDB(**model_kwargs)) # type: ignore[call-arg]
|
2024-01-29 16:35:42 +00:00
|
|
|
|
|
|
|
@classmethod
|
2024-02-05 19:22:06 +00:00
|
|
|
def from_checkpoint( # type: ignore[no-untyped-def]
|
2024-01-29 16:35:42 +00:00
|
|
|
cls,
|
|
|
|
checkpoint: Union[str, Path],
|
|
|
|
thirdai_key: Optional[str] = None,
|
|
|
|
):
|
|
|
|
"""
|
|
|
|
Create a NeuralDBVectorStore with a base model from a saved checkpoint
|
|
|
|
|
|
|
|
To use, set the ``THIRDAI_KEY`` environment variable with your ThirdAI
|
|
|
|
API key, or pass ``thirdai_key`` as a named parameter.
|
|
|
|
|
|
|
|
Example:
|
|
|
|
.. code-block:: python
|
|
|
|
|
|
|
|
from langchain_community.vectorstores import NeuralDBVectorStore
|
|
|
|
|
|
|
|
vectorstore = NeuralDBVectorStore.from_checkpoint(
|
|
|
|
checkpoint="/path/to/checkpoint.ndb",
|
|
|
|
thirdai_key="your-thirdai-key",
|
|
|
|
)
|
|
|
|
|
|
|
|
vectorstore.insert([
|
|
|
|
"/path/to/doc.pdf",
|
|
|
|
"/path/to/doc.docx",
|
|
|
|
"/path/to/doc.csv",
|
|
|
|
])
|
|
|
|
|
|
|
|
documents = vectorstore.similarity_search("AI-driven music therapy")
|
|
|
|
"""
|
|
|
|
NeuralDBVectorStore._verify_thirdai_library(thirdai_key)
|
|
|
|
from thirdai import neural_db as ndb
|
|
|
|
|
2024-02-05 19:22:06 +00:00
|
|
|
return cls(db=ndb.NeuralDB.from_checkpoint(checkpoint)) # type: ignore[call-arg]
|
2024-01-29 16:35:42 +00:00
|
|
|
|
|
|
|
@classmethod
|
|
|
|
def from_texts(
|
|
|
|
cls,
|
|
|
|
texts: List[str],
|
|
|
|
embedding: Embeddings,
|
|
|
|
metadatas: Optional[List[dict]] = None,
|
|
|
|
**kwargs: Any,
|
|
|
|
) -> "NeuralDBVectorStore":
|
|
|
|
"""Return VectorStore initialized from texts and embeddings."""
|
|
|
|
model_kwargs = {}
|
|
|
|
if "thirdai_key" in kwargs:
|
|
|
|
model_kwargs["thirdai_key"] = kwargs["thirdai_key"]
|
|
|
|
del kwargs["thirdai_key"]
|
|
|
|
vectorstore = cls.from_scratch(**model_kwargs)
|
|
|
|
vectorstore.add_texts(texts, metadatas, **kwargs)
|
|
|
|
return vectorstore
|
|
|
|
|
|
|
|
def add_texts(
|
|
|
|
self,
|
|
|
|
texts: Iterable[str],
|
|
|
|
metadatas: Optional[List[dict]] = None,
|
|
|
|
**kwargs: Any,
|
|
|
|
) -> List[str]:
|
|
|
|
"""Run more texts through the embeddings and add to the vectorstore.
|
|
|
|
|
|
|
|
Args:
|
|
|
|
texts: Iterable of strings to add to the vectorstore.
|
|
|
|
metadatas: Optional list of metadatas associated with the texts.
|
|
|
|
kwargs: vectorstore specific parameters
|
|
|
|
|
|
|
|
Returns:
|
|
|
|
List of ids from adding the texts into the vectorstore.
|
|
|
|
"""
|
|
|
|
import pandas as pd
|
|
|
|
from thirdai import neural_db as ndb
|
|
|
|
|
|
|
|
df = pd.DataFrame({"texts": texts})
|
|
|
|
if metadatas:
|
|
|
|
df = pd.concat([df, pd.DataFrame.from_records(metadatas)], axis=1)
|
2024-02-05 19:22:06 +00:00
|
|
|
temp = tempfile.NamedTemporaryFile("w", delete=False, delete_on_close=False) # type: ignore[call-overload]
|
2024-01-29 16:35:42 +00:00
|
|
|
df.to_csv(temp)
|
|
|
|
source_id = self.insert([ndb.CSV(temp.name)], **kwargs)[0]
|
|
|
|
offset = self.db._savable_state.documents.get_source_by_id(source_id)[1]
|
2024-02-05 19:22:06 +00:00
|
|
|
return [str(offset + i) for i in range(len(texts))] # type: ignore[arg-type]
|
2024-01-29 16:35:42 +00:00
|
|
|
|
|
|
|
@root_validator()
|
|
|
|
def validate_environments(cls, values: Dict) -> Dict:
|
|
|
|
"""Validate ThirdAI environment variables."""
|
|
|
|
values["thirdai_key"] = convert_to_secret_str(
|
|
|
|
get_from_dict_or_env(
|
|
|
|
values,
|
|
|
|
"thirdai_key",
|
|
|
|
"THIRDAI_KEY",
|
|
|
|
)
|
|
|
|
)
|
|
|
|
return values
|
|
|
|
|
2024-02-05 19:22:06 +00:00
|
|
|
def insert( # type: ignore[no-untyped-def, no-untyped-def]
|
2024-01-29 16:35:42 +00:00
|
|
|
self,
|
|
|
|
sources: List[Any],
|
|
|
|
train: bool = True,
|
|
|
|
fast_mode: bool = True,
|
|
|
|
**kwargs,
|
|
|
|
):
|
|
|
|
"""Inserts files / document sources into the vectorstore.
|
|
|
|
|
|
|
|
Args:
|
|
|
|
train: When True this means that the underlying model in the
|
|
|
|
NeuralDB will undergo unsupervised pretraining on the inserted files.
|
|
|
|
Defaults to True.
|
|
|
|
fast_mode: Much faster insertion with a slight drop in performance.
|
|
|
|
Defaults to True.
|
|
|
|
"""
|
|
|
|
sources = self._preprocess_sources(sources)
|
|
|
|
self.db.insert(
|
|
|
|
sources=sources,
|
|
|
|
train=train,
|
|
|
|
fast_approximation=fast_mode,
|
|
|
|
**kwargs,
|
|
|
|
)
|
|
|
|
|
2024-02-05 19:22:06 +00:00
|
|
|
def _preprocess_sources(self, sources): # type: ignore[no-untyped-def]
|
2024-01-29 16:35:42 +00:00
|
|
|
"""Checks if the provided sources are string paths. If they are, convert
|
|
|
|
to NeuralDB document objects.
|
|
|
|
|
|
|
|
Args:
|
|
|
|
sources: list of either string paths to PDF, DOCX or CSV files, or
|
|
|
|
NeuralDB document objects.
|
|
|
|
"""
|
|
|
|
from thirdai import neural_db as ndb
|
|
|
|
|
|
|
|
if not sources:
|
|
|
|
return sources
|
|
|
|
preprocessed_sources = []
|
|
|
|
for doc in sources:
|
|
|
|
if not isinstance(doc, str):
|
|
|
|
preprocessed_sources.append(doc)
|
|
|
|
else:
|
|
|
|
if doc.lower().endswith(".pdf"):
|
|
|
|
preprocessed_sources.append(ndb.PDF(doc))
|
|
|
|
elif doc.lower().endswith(".docx"):
|
|
|
|
preprocessed_sources.append(ndb.DOCX(doc))
|
|
|
|
elif doc.lower().endswith(".csv"):
|
|
|
|
preprocessed_sources.append(ndb.CSV(doc))
|
|
|
|
else:
|
|
|
|
raise RuntimeError(
|
|
|
|
f"Could not automatically load {doc}. Only files "
|
|
|
|
"with .pdf, .docx, or .csv extensions can be loaded "
|
|
|
|
"automatically. For other formats, please use the "
|
|
|
|
"appropriate document object from the ThirdAI library."
|
|
|
|
)
|
|
|
|
return preprocessed_sources
|
|
|
|
|
2024-02-05 19:22:06 +00:00
|
|
|
def upvote(self, query: str, document_id: Union[int, str]): # type: ignore[no-untyped-def]
|
2024-01-29 16:35:42 +00:00
|
|
|
"""The vectorstore upweights the score of a document for a specific query.
|
|
|
|
This is useful for fine-tuning the vectorstore to user behavior.
|
|
|
|
|
|
|
|
Args:
|
|
|
|
query: text to associate with `document_id`
|
|
|
|
document_id: id of the document to associate query with.
|
|
|
|
"""
|
|
|
|
self.db.text_to_result(query, int(document_id))
|
|
|
|
|
2024-02-05 19:22:06 +00:00
|
|
|
def upvote_batch(self, query_id_pairs: List[Tuple[str, int]]): # type: ignore[no-untyped-def]
|
2024-01-29 16:35:42 +00:00
|
|
|
"""Given a batch of (query, document id) pairs, the vectorstore upweights
|
|
|
|
the scores of the document for the corresponding queries.
|
|
|
|
This is useful for fine-tuning the vectorstore to user behavior.
|
|
|
|
|
|
|
|
Args:
|
|
|
|
query_id_pairs: list of (query, document id) pairs. For each pair in
|
|
|
|
this list, the model will upweight the document id for the query.
|
|
|
|
"""
|
|
|
|
self.db.text_to_result_batch(
|
|
|
|
[(query, int(doc_id)) for query, doc_id in query_id_pairs]
|
|
|
|
)
|
|
|
|
|
2024-02-05 19:22:06 +00:00
|
|
|
def associate(self, source: str, target: str): # type: ignore[no-untyped-def]
|
2024-01-29 16:35:42 +00:00
|
|
|
"""The vectorstore associates a source phrase with a target phrase.
|
|
|
|
When the vectorstore sees the source phrase, it will also consider results
|
|
|
|
that are relevant to the target phrase.
|
|
|
|
|
|
|
|
Args:
|
|
|
|
source: text to associate to `target`.
|
|
|
|
target: text to associate `source` to.
|
|
|
|
"""
|
|
|
|
self.db.associate(source, target)
|
|
|
|
|
2024-02-05 19:22:06 +00:00
|
|
|
def associate_batch(self, text_pairs: List[Tuple[str, str]]): # type: ignore[no-untyped-def]
|
2024-01-29 16:35:42 +00:00
|
|
|
"""Given a batch of (source, target) pairs, the vectorstore associates
|
|
|
|
each source phrase with the corresponding target phrase.
|
|
|
|
|
|
|
|
Args:
|
|
|
|
text_pairs: list of (source, target) text pairs. For each pair in
|
|
|
|
this list, the source will be associated with the target.
|
|
|
|
"""
|
|
|
|
self.db.associate_batch(text_pairs)
|
|
|
|
|
|
|
|
def similarity_search(
|
|
|
|
self, query: str, k: int = 10, **kwargs: Any
|
|
|
|
) -> List[Document]:
|
|
|
|
"""Retrieve {k} contexts with for a given query
|
|
|
|
|
|
|
|
Args:
|
|
|
|
query: Query to submit to the model
|
|
|
|
k: The max number of context results to retrieve. Defaults to 10.
|
|
|
|
"""
|
|
|
|
try:
|
|
|
|
references = self.db.search(query=query, top_k=k, **kwargs)
|
|
|
|
return [
|
|
|
|
Document(
|
|
|
|
page_content=ref.text,
|
|
|
|
metadata={
|
|
|
|
"id": ref.id,
|
|
|
|
"upvote_ids": ref.upvote_ids,
|
|
|
|
"source": ref.source,
|
|
|
|
"metadata": ref.metadata,
|
|
|
|
"score": ref.score,
|
|
|
|
"context": ref.context(1),
|
|
|
|
},
|
|
|
|
)
|
|
|
|
for ref in references
|
|
|
|
]
|
|
|
|
except Exception as e:
|
|
|
|
raise ValueError(f"Error while retrieving documents: {e}") from e
|
|
|
|
|
2024-02-05 19:22:06 +00:00
|
|
|
def save(self, path: str): # type: ignore[no-untyped-def]
|
2024-01-29 16:35:42 +00:00
|
|
|
"""Saves a NeuralDB instance to disk. Can be loaded into memory by
|
|
|
|
calling NeuralDB.from_checkpoint(path)
|
|
|
|
|
|
|
|
Args:
|
|
|
|
path: path on disk to save the NeuralDB instance to.
|
|
|
|
"""
|
|
|
|
self.db.save(path)
|